Table 2. Antibiotic resistance genes identified in Levilactobacillus brevis KU15151 genome using RGI and ResFinder analyses
Tool
Hit type
Gene
Associated resistance
Sequence identity (%)
RGI
Strict
vanT gene in vanG cluster
Glycopeptide
31.82
RGI
Loose1)
Escherichia coli EF-Tu mutants conferring resistance to kirromycin
Elfamycin
70.59
RGI
Loose
Staphylococcus aureus rpoB mutants conferring resistance to rifampicin
Rifamycin
70.49
ResFinder2)
-
Not detected
-
-
RGI, Resistance Gene Identifier; -, not applicable. Loose hit with ≥70% sequence identity was considered putative antibiotic resistance genes. ResFinder thresholds: ≥90% sequence identity and ≥60% minimum alignment length.